投稿論文

  1. Yuto Kudo, Fumitoshi Kumaki, Masanari Nagasaka, Jun-ichi Adachi, Yoshifumi Noguchi, Nobuaki Koga, Hideyuki Itabashi, Miyabi Hiyama*, "Experimental and theoretical study for core excitation of Firefly luciferin" J. Phys. Chem. A, 128, 611-617 (2024) https://doi.org/10.1021/acs.jpca.3c07504
  2. Tamotsu Uchiyama, Taiji Nakamura, Miyabi Hiyama, Takako Kudo, ”Theoretical study of the Si/C equally-mixed dodecahedrane analogues” Molecules 28(6), 2769 (2023) https://doi.org/10.3390/molecules28062769
  3. Ryohei Ono, Keita Osawa, Yutaka Takahashi, Yoshifumi Noguchi, Nobuo Kitada, Ryohei Saito-Moriya, Takashi Hirano, Shojiro A. Maki, Keisei Shibata, Hidefumi Akiyama, Ken-ichiro Kanno, Hideyuki Itabashi, Miyabi Hiyama "Quantum Yield of Near-Infrared Bioluminescence with Firefly Luciferin Analog: AkaLumine" Journal of Photochemistry & Photobiology, A: Chemistry 434, 114270 (2023) https://doi.org/10.1016/j.jphotochem.2022.114270
  4. Ryo Kumagai, Ryohei Ono, Shu Sakimoto, Chiharu Suzuki, Ken-ichiro Kanno, Hiroshi Aoyama, Junko Usukura, Masataka Kobayashi, Hidefumi Akiyama, Hideyuki Itabashi, Miyabi Hiyama, "Photo-cleaving and photo-bleaching quantum yields of coumarin-caged luciferin" Journal of Photochemistry & Photobiology, A: Chemistry 434, 114230 (2023) https://doi.org/10.1016/j.jphotochem.2022.114230
  5. Ryo Kumagai, Ryohei Ono, Hidefumi Akiyama, Hideyuki Itabashi, Miyabi Hiyama: Photo-bleaching of Firefly Luciferin with UV Irradiation Chem. Phys. Lett.791, 139414 (2022) https://doi.org/10.1016/j.cplett.2022.139414
  6. Akihiko Uchiyama, Chisako Fujiwara, Yuta Inoue, Miyabi Hiyama, Hideyuki Itabashi, Sei-ichiro Motegi: The effect of balneotherapy with natural mineral dissolved water on dry skin in atopic dermatitis: A phage IIa, non-randomized, controlled study Journal of Cutaneous Immunology and Allergy, 4, 159-165 (2021) https://doi.orgi/10.1002/cia2.12195
  7. Haruhisa Ogawa, Ryohei Ono, Yoshifumi Noguchi, Nobuo Kitada, Ryohei Saito-Moriya, Shojiro A. Maki, Hidefumi Akiyama, Hideyuki Itabashi, Miyabi Hiyama: Absorption Spectra for Firefly Bioluminescence Substrate Analog: TokeOni in Various pH Solutions Photochem. Photobiol. 97, 1016-1022 (2021) https://doi.org/10.1111/php.13458
  8. Masaru Chiyomaru, Keiro Higuchi, Miyabi Hiyama, Hideyuki Itabashi: (千代丸 勝，樋口慶郎，樋山みやび，板橋英之) Automated Continuous Monitoring FIA System for Silicate and Its Application to Plant Water Quality Control (シリカの連続自動モニタリングFIAシステムの開発プラントの水質管理への応用), Journal of Flow Injection Analysis Vol. 37, No. 2, 67 - 72 (2020)
  9. Yoshifumi Noguchi, Miyabi Hiyama, Motoyuki Shiga, Hidefumi Akiyama, Osamu Sugino: Quantum-Mechanical Hydration Plays Critical Role in the Stability of Firefly Oxyluciferin Isomers: State-of-the-art Calculations of the Excited States J. Chem. Phys. 153,201103 (2020)
  10. Di Gao, Konomi Omi, Nobuhiko Wada, Masanobu Mori, Miyabi Hiyama, Hideyuki Itabashi: All Injection Analysis to Determine Heavy Metal Speciation in Accumulated Soil in Japan J. Flow Injection Anal. Vol. 37, No. 2, 61 - 65 (2020)
  11. Junko Usukura, Miyabi Hiyama, Maki Kurata, Yuji Hazama, Xingping Qiu, Francoise M. Winnik, Hidefumi Akiyamaa, Nobuaki Koga: Theoretical study of the wavelength selection for the photocleavage of coumarin-caged D-luciferin Photochem. Photobiol., 96, 805-814(2020)
  12. Yoshifumi Noguchi, Miyabi Hiyama, Motoyuki Shiga, Hidefumi Akiyama, Osamu Sugino: Photoabsorption Spectra of Aqueous Oxyluciferin Anions Elucidated by Explicit Quantum Solvent Journal of Chemical Theory and Computation, 15, 5474-5482 (2019)
  13. Maki Kurata, Miyabi Hiyama, Takuma Narimatsu, Yuji Hazama, Takashi Ito, Yuhei Hayamizu, Xingping Qiu, Francoise M. Winnik, Hidehumi Akiyama: Synthesis and quantitative characterization of coumarin caged D-luciferin J. Photochem. Photobiol. B, 189, 81-86 (2018)
  14. Miyabi. Hiyama, Motoyuki Shiga, Nobuaki Koga, Osamu Sugino, Hidefumi Akiyama, Yoshifumi Noguchi: Effect of dynamical fluctuations of hydration structures on the absorption spectra of oxyluciferin anions in aqueous solution Phys. Chem. Chem. Phys., 19, 10028-10035 (2017)
  15. Miyabi Hiyama, Hidefumi Akiyama, Nobuaki Koga: Theoretical insights into the effect of pH values on oxidation processes in the emission of firefly luciferin in aqueous solution Luminescence: The Journal of Biological and Chemical Luminescence, 32, 1100-1108 (2017)
  16. Yoshifumi Noguchi, Miyabi Hiyama, Motoyuki Shiga, Osamu Sugino, Hidefumi Akiyama: Reverse Stability of Oxyluciferin Isomers in Aqueous Solutions J. Phys. Chem. B, 120, 8776-8783 (2016)
  17. Miyabi Hiyama, Yoshifumi Noguchi, Hidefumi Akiyama, Kenta Yamada, Nobuaki Koga: Vibronic structures in absorption and fluorescence spectra of firefly oxyluciferin in aqueous solutions Photochem. Photobiol., 91, 819-827 (2015)
  18. Yoshifumi Noguchi, Miyabi Hiyama, Hidefumi Akiyama, Yoshihisa Harada, Nobuaki Koga: First-Principles Investigation of Strong Excitonic Effects in Oxygen 1s X-Ray Absorption Spectra J. Chem. Theo. Compt. 11, 1668-1673 (2015)
  19. Miyabi Hiyama, T. Mochizuki, Hidefumi Akiyama, Nobuaki Koga: Analysis of Oxyluciferin Photoluminescence Pathways in Aqueous Solutions Photochem. Photobiol., 91,74-83 (2015)
  20. Yoshifumi Noguchi, Miyabi Hiyama, Hidefumi Akiyama, Nobuaki Koga: First-Principles Investigation on Rydberg excitations of Firefly Luciferin Anion in Vacuum. J. Chem. Phys. 141, 044309 (2014)
  21. Toshimitsu Mochizuki, Yu Wang, Miyabi Hiyama, Hidefumi Akiyama: Temperature-Sensitive Quantum Yields and Quantitative Spectra of Firefly Bioluminescence. Appl. Phys. Lett. 104, 213704 (2014)
  22. Miyabi Hiyama, Hidefumi Akiyama, Toshimitsu Mochizuki, Kenta Yamada, Nobuaki Koga: Analysis of Photoexcitation Energy Dependence in the Photo Luminescence of Firefly Luciferin. Photochem. Photobiol.,90, 820-828 (2014)
  23. Miyabi Hiyama, Hidefumi Akiyama, K. Yamada, Nobuaki Koga: Theoretical Study of Fluorescence Spectra Utilizing the pKa Values of Acids in Their Excited States. Photochem. Photobiol., 90,35-44 (2014)
  24. Miyabi Hiyama, Kenta Yamada, Toshimitsu Mochizuki, Hidefumi Akiyama, Nobuaki Koga: Theoretical study of pH dependence on photoluminescence of firefly luciferin. Luminescence 29, 70 (2014)
  25. Hidefumi Akiyama, Y. Wang, Miyabi Hiyama, Toshimitsu Mochizuki, Kanako Terakado, Toru Nakatsu: How can quantitative bioluminescence and in-situ fluorescence of firefly oxyluciferin in luciferase be compared with theoretical calculations? Luminescence 29, 7 - 8 (2014)
  26. Yoshifumi Noguchi, Miyabi Hiyama, Hidefumi Akiyama, Nobuaki Koga: First-Principles Investigation on Optical Properties of Firefly Luciferin Anion. Luminescence 29, 86 - 87 (2014)
  27. Yasuhiro Kajima, Shuji Ogata, Ryo Kobayashi, Miyabi Hiyama, Tomoyuki Tamura, Fluctuation Local Recrystallization of Quati-Luquid Layer of Sub-micrometer- scaled Ice: A Molecular Dynamics Study. J. Phys. Soc. Japan, 83, 083601-1 - 083601-4 (2014)
  28. Miyabi Hiyama, Hidefumi Akiyama, Yu Wang, Nobuaki Koga: Theoretical Study of Oxyuciferin pKa Values; Relative Absorption Intensity in Aqueous Solutions. Chem. Phys. Lett., 577, 121-126 (2013)
  29. Miyabi Hiyama, Hidefumi Akiyama, Kenta Yamada, Nobuaki Koga: Theoretical Study of Firefly Luciferin pKa Values - Relative Absorption Intensity in Aqueous Solutions. Photochem. Photobiol., 89,571-578 (2013)
  30. Yasuhiro Kajima, Miyabi Hiyama, Shuji Ogata, Tomoyuki Tamura, Ryo Kobayashi: Fast Time-Reversible Molecular Dynamics Algorithm for Rigid-Body Systems. J. Chem. Phys. 136, 234105-1-234105-8 (2013)
  31. Miyabi Hiyama, Hidefumi Akiyama, Kenta Yamada, Nobuaki Koga: Theoretical Study of Absorption and Fluorescence Spectra of Firefly Luciferin. Photochem. Photobiol., 88,889-898 (2012)
  32. Miyabi Hiyama, Nobuaki Koga: Theoretical study of electron transfer in Rhodobacter sphaeroides reaction center. Photochem. Photobiol., 87, 1297-1307 (2011)
  33. Yasuhiro Kajima, Miyabi Hiyama, Shuji Ogata, T. Tamura: Exactly Time-Reversible Molecular Dynamics Algorithm for Rigid-Body Systems, J. Phys. Soc. Japan, 80, 114002-1 - 114002-7 (2011)
  34. Miyabi Hiyama, Tomoyuki Kinjo, Shiaki Hyodo: Angular Momentum Form of Verlet Algorithm for Rigid Molecules, J. Phys Soc. Japan, 77, 064001-1 - 064001-12 (2008)
  35. Mark S. Child, Miyabi Hiyama: On the Choice of basis functions to eliminate false roots of the quantization condition in quantum defect theory, J. Phys., B40, 1233-1244 (2007)
  36. Miyabi Hiyama, Nobuhiro Kosugi: Application of R matrix / MQDT method to valence and core excitations in NO, J. Phys. B39, 1797-1811 (2006)
  37. Miyabi Hiyama, Nubohiro Kosugi: Ab initio R-Matrix/Multi-channel quantum defect theory applied to molecular core excitation and ionization, J. Electron Spectroscopy and Related Phenomena, 144-147, 1223-1226 (2005)
  38. Suomi Masuda, Tatsuo Gejo, Miyabi Hiyama, Nobuhiro Kosugi: Vibronic couplings in the C 1s-Rydberg and valence excitations of C2H2, revealed by angle-resolved photoion yield spectroscopy, J. Electron Spectroscopy and Related Phenomena, 144-147, 215-218 (2005)
  39. Miyabi Hiyama, Nobuhiro Kosugi: Ab initio R-Matrix/Multi-channel Quantum Defect Theory Approach to Study Molecular Core Excitation and Ionization: GSCF4R, J. Theoretical and Computational Chemistry, 4, 35-47 (2005)
  40. Miyabi Hiyama, Nobuhiro Kosugi: Ab initio R-Matrix/MQDT method for near-edge x-ray absorption fine structure, Physica. Scripta, T115, 136-139 (2005)
  41. Miyabi Hiyama, Mark S. Child: Ab initio R-matrix/ MQDT study of nitric oxide II. Analysis of valence/ Rydberg interactions, J. Phys., B36 4547-4559 (2003)
  42. Miyabi Hiyama, Kiyohiko Someda: Photoelectron spectra in intense laser fields: The effect of resonance with autoionizing Rydberg states, Physical Review, A68, 043402-1 ? 043402-8 (2003)
  43. Miyabi Hiyama, Mark S. Child: Ab initio R-matrix/ multichannel quantum defect theory study of nitric oxide, J. Phys. B35, 1337-1351 (2002)
  44. Miyabi Hiyama, Mark S. Child: Computation of negative energy Coulomb functions, J. Phys., B34, 3935-3950 (2001)
  45. Miyabi Hiyama, Kiyohiko Someda: Stabilization of diatomic molecules against ionization in intense laser fields: Effects of overlapping resonance, Physical Review, A61, 023411-1-023411-8 (2000)
  46. Miyabi Hiyama, Kiyohiko Someda: Ionization of atoms in intense laser fields. Strong mixing of auto- and photoionizations, Chem. Phys. Lett., 287, 613-619 (1998)
  47. Miyabi Hiyama, Nobohiro Kosugi, Hiroki Nakamura: Characteristics and dynamics of superexcited states of diatomic molecules: General theoretical procedure, J. Chem. Phys. 107,9379-9381 (1997)
  48. Miyabi Hiyama, Hiroki Nakamura: Two-center Coulomb functions, Comp. Phys. Comm., 103, 209 - 216 (1997)
  49. Miyabi Hiyama, Hiroki Nakamura: Gaussian expansions of the two-center Coulomb functions, Comp. Phys. Comm., 103, 197-208 (1997)
  50. Miyabi Hiyama, Hiroki Nakamura: Superexcited states of CO near the first ionization threshold, Chem. Phys. Lett., 248, 316-320 (1996)
  51. Miyabi Hiyama, Suehiro Iwata: Theoretical assignment of the vibronic bands in the photoelectron spectra of N2 below 30 eV, Chem. Phys. Lett., 211, 319-327 (1993)
  52. Miyabi Hiyama, Suehiro Iwata: Assignment of the photoelectron spectrum of HCl above 20 eV, Chem. Phys. Lett., 210, 187-192 (1993)
  53. Miyabi Hiyama, Sinkoh Nanbu, Suehiro Iwata: The excimer emission spectra and the interaction potential energy of the ground and excited states of He and alkali metal systems, Chem. Phys. Lett. 192, 443-450 (1992)

学会プロシーディングス

  1. 丹羽 洋平、鍜島康裕、尾形修司、樋山みやび、小林亮、田村友幸: 「大規模な水分子クラスターの外部電場に対する時間応答に関する剛体動力学シミュレーション」 日本機械学会　2012年度　第25回計算力学講演会 2012年10月6日　2116　CD-ROM論文集　pp.204-205
  2. 鍜島康裕、樋山みやび、尾形修司、田村友幸: 「大規模な剛体分子集合系のための古典MDコードの開発」 日本機械学会　2012年度　第25回計算力学講演会2012年10月6日 2115 CD-ROM論文集　pp.202-203
  3. 鍜島康裕、樋山みやび、尾形修司、田村友幸: 「時間反転対称性を明示的に取り入れた剛体分子系の動力学アルゴリズム」 日本機械学会　2011年度　第24回計算力学講演会CD-ROM論文集　pp469-470
  4. 樋山みやび、兵頭志明 : 「分子間の相対配向を取り入れた反応確率の計算方法」 日本機械学会 2009年度 第22回計算力学講演会CD-ROM論文集　pp.698-699

総説

  1. 樋山みやび:「ホタル生物発光関連分子の電子状態に関する理論的研究」樋山みやび, 原子衝突学会　学会誌しょうとつ, Vol. 16, Issue 5　2019年9月号　p.75-86 (2019)
  2. 秋山 英文, 望月 敏光, 樋山 みやび : ホタル生物発光と物理, 日本物理学会誌 69(4) 218-222, 2014年4月 (2014)
  3. 樋山みやび:R matrix/MQDT 法による分子内殻励起機構の解明, 原子衝突研究協会　学会誌しょうとつ,2006年1月号, 3-17 (2006)
  4. Lucas Pichl, Miyabi Hiyama, Hiroki Nakamura: Analytical Treatment of the K matrix Integral Equation in the Dynamics of Superexcited Molecules, Dissociative Recombination of Molecular Ions with Electrons, (edited by S. L. Guberman, Kluwer Academic/Plenum Publishers) 167-176 (2003)
  5. Miyabi Hiyama, Hiroki Nakamura: Characteristics and Dynamics of Superexcited States of Diatomic Molecules, Structure and Dynamics of Electronic Excited States, (edited by J. Laane, H. Takahashi, A. Bandrauk, Springer-Verlag) 296-317 (1998)
  6. Miyabi Hiyama, Hiroki Nakamura: Characteristics and Dynamics of Superexcited States of CO, Dissociative Recombination: Theory, Experiment and<81>@Applications III, (edited by D. Zaifman, J. B. A. Mitchell, D. Schwalm, and B. R. Rowe, World Scientific), 212-215 (1995)

その他

  1. 樋山みやび: ホタル生物発光と反応経路, 特定非営利活動法人量子化学探索研究所, IQCE_NEWS 036. 2016.06.01, p.1 (2016)